Faculty of Science

Biotechnology & Biomolecular Science - (S40)

Book - Edited

Freestone, R., Bagnara, AS., Scoufis, M. & Pratt, CC. The Learning Community. 1. Sydney, Australia, UNSW, Sydney, Australia, 2003.

Book Chapter - DEST

*Borody, TJ., *Clancy, R., *Warren, EF., *Surace, R., Brusentsev, S. & Mitchell, HM. 'Antibiotic sensitivities of Helicobacter pylori vary at different gastric mucosal sites'. In: RH Hunt, GNJ Tytgat, eds. Helicobacter pylori: Basic mechanisms to clinical cure 2002. The Netherlands: Kluwer Academic, 2003.

Lee, A., Thompson, L. & O'Rourke, JL. 'Priorities for future research: microbiology'. In: RH Hunt, GNJ Tytgat, eds. Helicobacter pylori: Basic mechanisms to clinical cure 2002. The Netherlands: Kluwer Academic, 2003.

Lee, A. & O'Rourke, JL. 'What are the new helicobacters?'. In: RH Hunt, GNJ Tytgat, eds. Helicobacter pylori: Basic mechanisms to clinical cure 2002. The Netherlands: Kluwer Academic, 2003.

*Solnick, JV., O'Rourke, JL., *Vandamme, P. & Lee, A. 'The Genus Helicobacter'. In: , eds. The Prokaryote: An evolving electronic database for the Microbiological Community. 3rd. Berlin: Springer-Verlag, 2003.

Book Chapter - non DEST

Cavicchioli, R. & Ostrowski, ML. 'Ultramicrobacteria'. In: , eds. Nature Encyclopaedia of Life Sciences. UK: Macmillan Publishers Nature Publishing Group, 2003.

Journal Article - Refereed Article

Alic, N., Higgins, VJ., *Pichova, A., *Breitenbach, M. & Dawes, IW. 'In Saccharomyces cerevisiae, a lipid hydroperoxide activates the mitogen-activated protein kinase Mpk1p, independently of the cell-cycle regulating Oca1p'. Journal of Biological Chemistry 2003; 278: pp. 41849 - 41855.

Ammaranond, P., Cunningham, P., Oelrichs, RB., Suzuki, K., Harris, C., *Leas, L., Grulich, AE., Cooper, DA. & Kelleher, AD. 'No increase in protease resistance and a decrease in reverse transcriptase resistance mutations in primary HIV-1 infection: 1992-2001'. AIDS 2003; 17: pp. 264 - 267.

Ammaranond, P., Cunningham, P., *Oelrichs, RB., Suzuki, K., Harris, C., *Leas, L., Grulich, AE., Cooper, DA. & Kelleher, AD. 'Rates of transmission of antiretroviral drug resistant strains of HIV-1'. J Clin Virol 2003; 26: p. 153.

*Arevalo-Ferro, C., *Hentzer, M., *Reil, G., *Gorg, A., Kjelleberg, S., *Givskov, M., *Riedel, K. & *Eberl, L. 'Identification of quorum-sensing regulated proteins in the opportunistic pathogen Pseudomonas aeruginosa by proteomics'. Environmental Microbiology 2003; 5: pp. 1350 - 1369.

*Banks, SC., *Horsup, A., Wilton, AN. & *Taylor, AC. 'Genetic marker investigation of the source and impact of predation on a highly endangered species'. Molecular Ecology 2003; 12: pp. 1663 - 1667.

Barner-Kowollik, CW., Dalton, HM., Davis, TP. & Stenzel-Rosenbaum, M. 'Nano-and Micro-Engineering of Ordered Porous Blue-Light Emitting Films by Templating Well-Defined Organic Polymers Around Condensing Water Droplets'. Angewandte Chemie 2003; 42: pp. 3664 - 3668.

Barry, JB., Leong, GM., Church, B., Issa, LL., Eisman, JA. & Gardiner, EM. 'Interactions of SKIP/NCoA-62, TFiiB, and Retinoid X Receptor with Vitamin D Receptor Helix H10 Residues'. Journal of Biological Chemistry 2003; 278(10): pp. 8224 - 8228.

Biagini, GA., *Yarlett, N., Ball, GE., *Billetz, AC., *Lindmark, DG., *Martinez, MP., *Lloyd, D. & Edwards, M. 'Bacterial-like energy metabolism in the amitochondriate protozoon Hexamita inflata.'. Molecular and Biochemical Parasitology 2003; 128(Issue): pp. 11 - 19.

Boominathan, R. & Doran, PM. 'Cadmium tolerance and antioxidative defenses in hairy roots of the cadmium hyperaccumulator, Thlaspi caerulescens'. Biotechnology and Bioengineering 2003; 83: pp. 158 - 167.

Boominathan, R. & Doran, PM. 'Organic acid complexation, heavy metal distribution and the effect of ATPase inhibition in hairy roots of hyperaccumulator plant species'. Journal of Biotechnology 2003; 101: pp. 131 - 146.

Boonmee, M., Leksawasdi, N., Bridge, WJ. & Rogers, PL. 'Batch and continuous culture of Lactococcus lactis NZ133: experimental data and model development'. Biochemical Engineering Journal 2003; 14: pp. 127 - 135.

*Bryant, NJ. & James, DE. 'The Sec1p/Munc18 (SM) Protein, Vps45p, Cycles On and Off Membranes During Vesicle Transport'. J Cell Biol 2003; 26(161): pp. 691 - 696.

*Burkhart, CA., Cheng, AJ., Madafiglio, J., Kavallaris, M., *Mili, M., Marshall, GM., *Weiss, WA., Khachigian, LM., Norris, MD. & Haber, M. 'Effects of MYCN antisense oligonucleotide administration on tumorigenesis in a murine model of neuroblastoma'. J. of the National Cancer Institute 2003; 95(18): pp. 1394 - 1403.

*Caldon, CE. & March, PE. 'Function of the universally conserved bacterial GTPases'. Current Opinion in Microbiology 2003; 6: pp. 135 - 139.

Cavicchioli, R., Ostrowski, ML., Fegatella, F. & Guixa-Boixereu, N. 'Life under Nitrient Limitation in Oligotrophic Marine Environments: An Eco/Physiological Perspective of Sphingopyxis alaskensis (Formerly Sphingomonas alaskensis)'. Microbial Ecology 2003; 45: pp. 203 - 217.

Cavicchioli, R., Curmi, PM., Saunders, NF. & Thomas, T. 'Pathogenic archaea: do they exist?'. BioEssays 2003; 25: pp. 1119 - 1128.

*Chakravarti, A. & Little, PF. 'Nature, nurture and human disease'. Nature 2003; 421: pp. 412 - 414.

Cheung, B., *Yan, JX., *Smith, SA., Nguyen, TG., Lee, M., Kavallaris, M., Norris, MD., Haber, M. & Marshall, GM. 'Growth inhibitory retinoid effects after recruitment of retinoid X receptor B to the retinoic acid receptor B promoter'. International J. of Cancer 2003; 105: pp. 856 - 867.

Clancy, JL., *Henderson, MJ., *Russell, AJ., *Anderson, D., *Bova, RJ., *Campbell, IG., *Choong, DH., *MacDonald, GJ., *Mann, GJ., *Nolan, T., *Brady, G., *Olopade, OI., *Woollatt, E., *Davies, MJ., Segara, D. and others. 'Edd, the human orthologue of the hyperplastic discs tumour supressor gene, is amplified and overexpressed in cancer'. Oncogene 2003; 22(32,): pp. 5070 - 5081.

*Collins, BM., *Cubeddu, L., *Naidoo, N., *Harrop, SJ., Kornfeld, GD., Dawes, IW., *Curmi, PM. & Mabbutt, BC. 'Homomeric ring assemblies of eukaryotic Sm proteins have affinity for both RNA and DNA: crystal structure of an oligomeric complex of yeast SmF'. Journal of Biological Chemistry 2003; 278: pp. 17291 - 17298.

Collins, AM., Sewell, WA. & *Edwards, MR. 'Immunoglobulin gene rearrangement, repertoire diversity, and the allergic response'. Pharmacology and Therapeutics 2003; 100: pp. 157 - 170.

Craig, ME., Robertson, PW., *Howard, N., *Silink, M. & Rawlinson, W. 'Diagnosis of Enterovirus Infection by Genus-Specific PCR and Enzyme-Linked Immunosorbent'. Journal of Clinical Microbiology 2003; 3.565: pp. 841 - 844.

Di Giusto, DA. & King, GC. 'Single base extension (SBE) with proofreading polymerases and phosphorothioate primers: improved fidelity in single-substrate assays'. Nucleic Acids Research 2003; 31(3): pp. 1 - 12.

*Fagerlind, M., Rice, SA., *Nilsson, P., *Harlen, M., James, SG., Charlton, TS. & Kjelleberg, S. 'The Role of Regulators in the Expression of Quorum-Sensing Signals in Pseudomonas aeruginosa'. Journal of Molecular Microbiology and Biotechnology 2003; 6: pp. 88 - 100.

Foster, LJ., Catzel, D., Zarka, M. & Mahler, SM. 'Increase in synthesis of human monoclonal antibodies by transfected Sp2/0 myeloma mouse cell line under conditions of microgravity'. Biotechnology Letters 2003; 25: pp. 1271 - 1274.

Freeman, AJ., *Pan, Y., Harvey, CE., Post, JJ., Law, MG., White, PA., Rawlinson, W., Lloyd, AR., Marinos, G. & Ffrench, R. 'The presence of an intrahepatic cytotoxic T lymphocyte response is associated with low viral load in patients with chronic hepatitis C virus infection'. Journal of Hepatology 2003; 38: pp. 349 - 356.

Hao, X., Albertin, L., Foster, LJ., Davis, TP. & Barner-Kowollik, CW. 'A new chemo-enzymatic route to side-chain liquid-crystalline polymers: the synthesis and polymerization of 6-(4-Methoxybiphenyl-4'-oxy)hexyl vinyl hexanedioate'. Macromolecular Bioscience 2003; 3: pp. 675 - 683.

*Hentzer, M., *Wu, HM., *Andersen, JB., *Riedel, K., *Rasmussen, TB., *Bagge, N., Kumar, N., *Schembri, M., *Song, Z., *, PK., *, MM., *Costerton, JW., *Molin, S., *Eberl, L., Steinberg, PD. and others. 'Attenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors'. European Molecular Biology Organization 2003; 22(15): pp. 3803 - 3815.

Higgins, VJ., *Rogers, PJ. & Dawes, IW. 'Application of genome-wide expression analysis to identify molecular markers useful in monitoring industrial fermentations'. Applied and Environmental Microbiology 2003; 69: pp. 7535 - 7540.

Higgins, VJ., Beckhouse, AG., *Oliver, AD., *Rogers, PJ. & Dawes, IW. 'Yeast genome-wide expression analysis identifies a strong ergosterol and oxidative stress response during the initial stages of an industrial lager fermentation'. Applied and Environmental Microbiology 2003; 69: pp. 4777 - 4787.

*Hovey, RC., Harris, J., *Hadsell, DL., Lee, A., Ormandy, CJ. & *Vonderhaar, BK. 'Local insulin-like growth factor-II mediates prolactin-induced mammary gland development'. Mol Endocrinol 2003; 17: pp. 460 - 471.

*Hu, SH., *Gee, CL., *Latham, CF., *Rowlinson, S., *Rova, U., *Bryant, NJ., *Jones, A., *Halliday, JA., James, DE. & *Martin, JL. 'Recombinant expression of Munc18c in a baculovirus system and interaction with syntaxin4'. Protein Expression and Purification 2003; 31: pp. 305 - 310.

*Huntley, D., *Hummerich, H., *Smedley, D., *Kittivoravitkul, S., *McCarthy, M., Little, PF. & *Sergot, M. 'GANESH: Software for Customized Annotation of Genome Regions'. Genome Research 2003; 13: pp. 2195 - 2202.

Jones, LA., Mciver, CJ., Rawlinson, W. & White, PA. 'Polymerase chain reaction screening for integrons can be used to complement resistance surveillance programs'. Communicable Diseases Intelligence 2003; (27): pp. 103 - 110.

*Kaffes, A., *Cullen, J., Mitchell, HM. & *Katelaris, PH. 'Effect of Helicobacter pylori infection and low-dose aspirin use on iron stores in the elderly'. Journal of Gastrenterology and Hepatology 2003; 18: pp. 1024 - 1028.

*Kavermann, H., Burns, BP., *Angermuller, K., *Odenbreit, S., *Fischer, W., *Melchers, K. & *hAAS, R. 'Identification and characterization of Helicobacter pylori genes essential for gastric colonization'. The Journal of Experimental Medicine 2003; 197: pp. 813 - 822.

Keane, J., *Ryan, D. & Gray, PP. 'Effect of Shear Stress on Expression of a Recombinant Protein by Chinese Hamster Ovary Cells'. Biotechnology and Bioengineering 2003; 81: pp. 211 - 220.

Kim, I., Barrow, KD. & Rogers, PL. '31P Nuclear magnetic resonance studies of acetate inhibition of ethanol production by strains of Zymomonas mobilis.'. Journal of Microbiology and Biotechnology 2003; (13): pp. 90 - 98.

Lalevski, H., Marquis, C., Catzel, D., Gray, PP., Van Dyk, D. & Mahler, SM. 'Purification of recombinant human growth hormone from CHO cell culture supernatant by Gradiflow preparative electrophoresis technology'. Protein Expression & Purification 2003; 32: pp. 126 - 134.

Lan, R., *Stevenson, G. & *Reeves, PR. 'Comparison of two major forms of the Shigella virulence plasmid pINV: positive selection is a major force driving the divergence'. Infection and Immunity 2003; 71: pp. 6298 - 6306.

Leksawasdi, N., *Breuer, M., *Hauer, B., Rosche, B. & Rogers, PL. 'Kinetics of Pyruvate Decarboxylase Deactivation by Benzaldehyde'. Biocatalysis and Biotransformation 2003; 21(6): pp. 315 - 320.

Lin, H., Kwok, KH. & Doran, PM. 'Development of Linum flavum hairy root cultures for production of coniferin'. Biotechnology Letters 2003; 25: pp. 521 - 525.

Lin, H., Kwok, KH. & Doran, PM. 'Production and podophyllotix using cross-species coculture of Linum flavum hairy roots and Podophyllum hexandrum cell suspensions'. Biotechnology Progress 2003; 19: pp. 1417 - 1426.

*Lloyd, D., *Harris, JC., Maroulis, SL., Mitchell, AJ., *Hughes, MN., Wadley, RB. & Edwards, MR. 'Nitrosative stress induced cytotoxicity in Giardia intestinalis'. Journal of Applied Microbiology 2003; 95: pp. 576 - 583.

Lukondeh, T., Ashbolt, NJ. & Rogers, PL. 'Evaluation of Kluyveromyces marxianus FII 510700 grown on a lactose-based medium as a source of a natural bioemulsifier'. Journal of Industrial Microbiology and Biotechnology 2003; 30: pp. 715 - 720.

Lukondeh, T., Ashbolt, NJ. & Rogers, PL. 'Evaluation of Kluyveromyces marxianus as a source of yeast autolysates'. Journal of Industrial Microbiology and Biotechnology 2003; 30(1): pp. 52 - 56.

Lukondeh, T., Ashbolt, NJ., Rogers, PL. & Hook, JM. 'NMR confirmation of an alkali-insoluble glucan from Kluyveromyces marxianus cultivated on a lactose-based medium'. World Journal of Microbiology & Biotechnology 2003; 19(4): pp. 349 - 355.

*Lynch, DK., Winata, SC., *Lyons, RJ., *Hughes, WP., *Lehrbach, GM., Wasinger, VC., Corthals, GL., *Cordwell, SJ. & Daly, RJ. 'A cortactin/CD2-associated protein (CD2AP) complex provides a novel link between epidermal growth factor receptor endocytosis and the actin cytoskeleton'. J Biol Chem 2003; 278: pp. 21805 - 21813.

*Mackie, JT. & O'Rourke, JL. 'Gastritis Associated with Helicobacter-like Organisms in Baboons'. Veterinary Pathology 2003; 40: pp. 563 - 566.

Mahler, SM. & Coleman, L. 'Purification of Fab fragments from a monoclonal antibody papain digest by Gradiflow electrophoresis'. Protein Expression & Purification 2003; 32: pp. 246 - 251.

Mahler, SM., Chin, D. & Van Dyk, D. 'The application of emerging technologies in genomics and proteomics to drug develolpment'. Journal of Pharmacy Practice and Research 2003; 33: pp. 7 - 11.

*Manefield, M., Kjelleberg, S. & *Givskov, M. 'Controlling Bacterial Infection by Inhibiting Intercellular Signalling'. Current Medicinal Chemistry 2003; 2: pp. 213 - 218.

*Marais, A., *Bilardi, C., Mendz, GL. & *Megraud, F. 'Characterization of the genes rdxA and frxA invlved in metronidazole resistance in Helicobacter pylori'. Research in Microbiology 2003; 154: pp. 137 - 144.

Maroulis, SL., Schofield, PJ. & Edwards, M. 'Osmoregulation in the Parasitic Protozoan Tritrichomonas foetus'. Applied & Environmental Microbiology 2003; 69(8): pp. 4527 - 4533.

Mcdougald, SD., Srinivasan, S., Rice, SA. & Kjelleberg, S. 'Signal-mediated cross-talk regulates stress adaptation in Vibrio species'. Microbiology 2003; 149: pp. 1923 - 1933.

Mendz, GL. & Burns, BP. 'Characterization of Arginine Transport in Helicobacter pylori'. Helicobacter 2003; 8: pp. 245 - 251.

*Merrell, DS., Thompson, LJ., *Kim, CC., Mitchell, HM., *Tompkins, LS., Lee, A. & *Falkow, S. 'Growth Phase-Dependent Response of Helicobacter pylori to Iron Starvation'. Infection and Immunity 2003; , pp. 6510 - 6525.

Moffitt, MC. & Neilan, BA. 'Evolutionary affiliations within the superfamily of Ketosynthases reflect complex pathway associations'. Journal of Molecular Evolution 2003; 56: pp. 446 - 457.

Moore, MW., Svenson, C., Bowling, DC. & Glenn, DR. 'Complete nucleotide sequence of a native plasmid from Brevibacterium linens'. Plasmid 2003; 49: pp. 160 - 168.

Moy, YP., Neilan, BA., Foster, LJ., Madgwick, J. & Rogers, PL. 'Screening, identification and kinetic characterization of a bacterium for Mn(II) uptake and oxidation'. Biotechnology Letters 2003; 25: pp. 1407 - 1413.

*Mueller, A., O'Rourke, JL., *Grimm, J., *Guillemin, K., *Dixon, MF., Lee, A. & *Falkow, S. 'Distinct gene expression profiles characterize the histopathological stages of disease in Helicobacter-induced mucosa-associated lymphoid tissue lymphoma'. Proceedings of the National Academy of Science (USA) 2003; 100: pp. 1292 - 1297.

*Mueller, A., O'Rourke, JL., *Chu, P., *Kim, CC., Sutton, P., Lee, A. & *Falkow, S. 'Protective immunity against Helicobacter is characterized by a unique transcriptional signature'. Proceedings of the National Academy of Science, USA 2003; 100: pp. 12289 - 12294.

Neilan, BA., *Saker, M., *Fastner, J., *Torokne, A. & Burns, BP. 'Phylogeography of the invasive cyanobacterium Cylindrospermopsis raciborskii'. Molecular Ecology 2003; 12: pp. 133 - 140.

Nikodinovic, J., Barrow, KD. & *Chuck, J. 'High frequency transformation of the Amphotericin-producing bacterium Streptomyces nodosus'. Journal of Microbiological Methods 2003; 55: pp. 273 - 277.

Nikodinovic, J., Barrow, KD. & *Chuck, J. 'High yield preparation of genomic DNA from Streptomyces'. BioTechniques 2003; 35: pp. 932 - 936.

*Nolan, MA., Craig, ME., Lahra, MM., Rawlinson, W., *Prager, PC., Williams, GD., Bye, AM. & Andrews, PI. 'Survival after pulmonary edema due to enterovirus 71 encephalitis'. Neurology 2003; 5.340: pp. 1651 - 1656.

*Noon, KR., *Guymon, RR., *Crain, PF., *McCloskey, JA., *Thomm, M., Lim, J. & Cavicchioli, R. 'Influence of Temperature on tRNA Modification in Archaea: Methanococcoides burtonii (Optimum Growth Temperature [Topt], 23oC) and Stetteria hydrogenophila (Topt,95oC)'. Journal of Bacteriology 2003; 185: pp. 5483 - 5490.

O'Rourke, JL. & Lee, A. 'Animal models of Helicobacter pylori infection and disease'. Microbes and Infection 2003; 5: pp. 741 - 748.

*Pagan, JK., *Wylie, FG., *Joseph, S., *Widberg, C., *Bryant, NJ., James, DE. & *Stow, JL. 'The t-SNARE Syntaxin 4 is regulated during macrophage activation to function in membrane traffic and cytokine secretion'. Current Biology 2003; 16: pp. 156 - 160.

Plant, LJ. & Conway, PL. 'Gastrointestinal microbial community shifts observed following oral administration of a Lactobacillus fermentum strain to mice'. FEMS Microbiology Ecology 2003; 43: pp. 133 - 140.

Poljak, A., Dawes, IW., Ingelse, BA., Duncan, MW., Smythe, GA. & Grant, CM. 'Oxidative damage to proteins in yeast cells exposed to adaptive levels of H2O2'. Redox Reports 2003; 8: pp. 371 - 377.

Pomati, F., *Rossetti, C., *Calamari, D. & Neilan, BA. 'Effects ofSaxitoxin (STX) and Veratridine on Bacterial Na+-K+ Fluxes: a Prokaryote-based STX Bioassay'. Applied and Environmental Microbiology 2003; 69: pp. 7371 - 7376.

Pomati, F., Neilan, BA., *Suzuki, T., *Manarolla, G. & *Rossetti, C. 'Enhancement of intracellular saxitosin accumulation by lidocaine hydrochloride in the cyanobacterium Cylindrospermopsis Raciborskii T3 (Nostocales)'. Journal of Physiology 2003; 39: pp. 535 - 542.

*Prager, PC., Nolan, MA., Andrews, I. & Williams, GR. 'Neurogenic pulmonary edema in enterovirus 71 encehpalitis is not uniformly fatal but causes severe morbidity in survivirs.'. Pedatr. Crit. Care Med. 2003; 4(3): pp. 377 - 381.

Pulsawat, W., Leksawasdi, N., Rogers, PL. & Foster, LJ. 'Anions effects on biosorption of Mn(II) by extracellular polymeric substance (EPS) from Rhizobium etli'. Biotechnology Letters 2003; (25): pp. 1267 - 1270.

Ritchie, AJ., Yam, A., Tanabe, K., Rice, SA. & Cooley, MA. 'Modification of in viro and in vitro T- and B-Cell-Mediated Immune Responses by the Pseudomonas aeruginosa Quorum-Sensing Molecule N-(3-Oxododecanoyl)-L-Homoserine Lactone'. Infection and Immunity 2003; 71: pp. 4421 - 4431.

*Robillard, MS., Davies, NP., *van der Marel, GA., *van Boom, JH., *Reedijk, J. & Murray, VM. 'The interaction of peptide-tethered platinum(II) complexes with DNA'. Journal of Inorganic Biochemistry 2003; 96: pp. 331 - 338.

*Rohrlack, T., *Christoffersen, K., *Hansen, PE., *Zhang, W., *Czarnecki, O., *Henning, M., *Fastner, J., *Erhard, M., Neilan, BA. & *Kaebernick, M. 'Isolation, characterization, and quantitative analysis of microviridin J, a new Microcystis metabolite toxic to Daphnia'. Journal of Chemical Ecology 2003; 29: pp. 1757 - 1770.

Rosche, B., *Breuer, M., *Hauer, B. & Rogers, PL. 'Increased pyruvate efficiency in enzymatic production of (R)-phenylacetylcarbinol'. Biotechnology Letters 2003; (25): pp. 847 - 851.

Rosche, B., *Breuer, M., *Hauer, B. & Rogers, PL. 'Screening of yeasts for cell-free production of (R)-phenylacetylcarbinol'. Biotechnology Letters 2003; (25): pp. 841 - 845.

*Rosenberg, NA., *Tsolaki, AG. & Tanaka, M. 'Estimating change rates of genetic markers suing serial samples: applications to the transposon IS6110 in Mycobacterium tuberculosis'. Theoretical Population Biology 2003; 63: pp. 347 - 363.

*Russell, RA., *Holden, PJ., *Wilde, KL. & Neilan, BA. 'Demonstration of the use of Scenedesmus and Carteria biomass to drive bacterial sulfate reduction by Desulfovibrio Alcoholovorans isolated from an artificial wetland'. Hydrometallurgy 2003; 71: pp. 227 - 234.

*Saito, T., *Okano, K., *Park, H., *Itayama, T., *Inamori, Y., Neilan, BA., Burns, BP. & *Sugiura, N. 'Detection and sequencing of the microcystin LR-degrading gene, mlrA, from new bacteria isolated from Japanese lakes'. FEMS Microbiology Letters 2003; 229: pp. 271 - 276.

*Saker, M., *Nogueira, IC., *Vasconcelos, VM., Neilan, BA., *Eaglesham, G. & *Pereira, P. 'First report and toxicological assessment of the cyanobacterium Cylindrospermopsis raciborskii from Portuguese freshwaters'. Exotoxicology and Environmental Safety 2003; 55: pp. 243 - 250.

Saunders, NF., Thomas, T., Curmi, PM., *Mattick, JS., *Kuczek, E., *Slade, R., *Davis, J., *Franzmann, PD., *Boone, D., *Rusterholtz, K., *Feldman, R., *Gates, C., *Bench, S., *Sowers, KR., *Kadner, K. and others. 'Mechanisms of Thermal Adaptation Revealed from the Genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii'. Genome Research 2003; 13: pp. 1580 - 1588.

*Scheffner, M. & Whitaker, NJ. 'Human papillomavirus-induced carcinogenesis and the ubiquitin-proteasome system'. Seminars in Cancer Biology 2003; 13: pp. 59 - 67.

Scott, KF., Graham, GG. & Bryant, KJ. 'Secreted Phospholipase AS enzymes as therapeutic targets'. Expert Opinion on Therapeutic Targets 2003; 0: pp. 427 - 447.

Scott, KF., Graham, GG. & Bryant, KJ. 'Secreted phospholipase A2 enzymes as therapeutic targets'. Expert Opinion on Therapeutic Targets 2003; 7: pp. 427 - 440.

*Shewan, AM., *Van Dam, EM., *Martin, S., *Luen, TB., *Hong, W., *Bryant, NJ. & James, DE. 'GLUT4 Recycles via a trans-Golgi network (TGN) Subdomain enriched in Syntaxins 6 and16 but not TGN38: Involvement of an Acidic Targeting Motif'. Mol Biol Cell 2003; 14(3): pp. 973 - 986.

Shultz, T., Tapsall, JW., White, PA., *Ryan, CS., *Lyras, D., *Rood, JI., Binotto, E. & *Richardson, CJ. 'Chloramphenicol-resistant Neisseria meningitidis containing catP isolated in Australia'. Journal of Antimicrobial Chemotherapy 2003; 52: pp. 856 - 859.

Srinivasan, S., *Waters, MJ., *Rowlands, J., *Baxter, RC. & Verge, CF. 'Hyperinsulinism and overgrowth without obesity'. Archdischild. 2003; 88: pp. 332 - 334.

*Stennard, FA., *Costa, M., Elliott, D., *Rankin, S., *Haast, SJ., Lai, D., *McDonald, P., *Niederreither, K., *Dolle, P., *Bruneau, BG., *Zorn, AM. & Harvey, RJ. 'Cardiac T-box factor Tbx20 directly interacts with Nkx2-5, GATA4 and GATA5 in regulation of gene expression in the developing heart.'. Developmental Biology 2003; (262): pp. 206 - 224.

*Suerbaum, S., *Josenhans, C., *Sterzenbach, T., *Drescher, B., *Brandt, P., *Bell, M., *Droge, M., *Fartmann, B., *Fischer, H., *Ge, Z., *Horster, A., *Holland, R., *Klein, K., *Konig, J., *Macko, L. and others. 'The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus'. Proceedings of the National Academy of Science, USA 2003; 100: pp. 7901 - 7906.

Tan, TY., Valova, V., *Malladi, CS., *Graham, ME., *Berven, LA., *Jupp, OJ., *Hansra, G., *McClure, AJ., *Sarcevic, B., *Boadle, R., *Larsen, MR., *Cousin, MA. & *Robinson, P. 'Cdk5 is essential for synaptic vesicle endocytosis'. Nat Cell Biol 2003; 5: pp. 701 - 710.

Tanaka, M., *Bergstrom, CT. & *Levin, B. 'The Evolution of Mutator Genes in Bacterial Populations: The Roles of Environmental Change and Timing'. Genetics 2003; 164: pp. 843 - 854.

Thompson, LJ., *Merrell, DS., Neilan, BA., Mitchell, HM., Lee, A. & *Falkow, S. 'Gene Expression Profiling of Helicobacter pylori Reveals a Growth-Phase-Dependent Switch in Virulence Gene Expression'. Infection and Immunity 2003; 71: pp. 2643 - 2655.

Thompson, L., Webb, JS., Rice, SA. & Kjelleberg, S. 'The alternative sigma factor Rpo N regulates the quorum sensing gene rhlI in Pseudomonas aeruginosa'. FEMS Microbiology Letters 2003; 220: pp. 187 - 195.

Tran, N., Cairns, MJ., Dawes, IW. & *Arndt, G. 'Expressing functional siRNAs in mammalian cells using convergent transcription'. BMC Biotechnology 2003; 3: pp. 1 - 9.

Van Dyk, D., *Misztal, DD., *Wilkins, MR., Poljak, A., *Mackintosh, JA., Varnai, JC., *Teber, E., *Walsh, B. & Gray, PP. 'Identification of cellular changes associated with increased production of human growth hormone in a recombinant Chinese hamster ovary cell line.'. Proteomics 2003; 3(2): pp. 147 - 156.

*Veldhuyzen van Zanten, SJ., Kolesnikow, T., Leung, V., O'Rourke, JL. & Lee, A. 'Gastric Transitional Zones, Areas where Helicobacter Treatment Fails: Results of a Treatment Trial using the Sydney Strain Mouse Model'. Antimicrobial Agents and Chemotherapy 2003; 47: pp. 2249 - 2255.

*Verrills, NM. & Kavallaris, M. 'Drug Resistance Mechanisms in Cancer Cells: A Proteomics Perspective'. Current Opinion in Molecular Therapeutics 2003; 5: pp. 258 - 265.

*Verrills, NM., *Flemming, C., *Liu, M., *Ivery, M., *Cobon, GS., Norris, MD., Haber, M. & Kavallaris, M. 'Microtubule alterations and mutations induced by desoxyepothilone B: Implications for drug-target'. Chemistry & Biology 2003; 10: pp. 597 - 607.

*Verrills, NM., *Walsh, B., *Cobons, GS., *Hains, P. & Kavallaris, M. 'Proteome analysis of vinca alkaloid response and resistance in acute lymphoblastic leukaemia reveals novel cytoskeletal alternations'. J. of Biological Chemistry 2003; 278(46): pp. 45082 - 45093.

*Walsh, SJ., *Robinson, SL., *Turbett, GR., Davies, NP. & Wilton, AN. 'Characterisation of variant alleles at the HumD21S11 locus implies unique Australasian genotypes and re-classification of nomenclature guidelines'. Forensic Science International 2003; 135: pp. 35 - 41.

Webb, JS., *Givskov, M. & Kjelleberg, S. 'Bacterial biofilms: prokaryotic adventures in multicellularity'. Current Opinion in Microbiology 2003; 6: pp. 578 - 585.

Webb, JS., Thompson, L., James, SG., Charlton, TS., *Tolker-Nielsen, T., *Koch, B., *Givskov, M. & Kjelleberg, S. 'Cell Death in Pseudomonas aeruginosa Biofilm Development'. Journal of Bacteriology 2003; 185(15): pp. 4584 - 4592.

*Wheeler, GL., *Trotter, EW., Dawes, IW. & Grant, CM. 'Coupling of the transcriptional regulation of glutathione biosynthesis to the availability of glutathione and methionine via the Met4 and Yap1 transcription factors'. Journal of Biological Chemistry 2003; 278: pp. 49920 - 49928.

*Widberg, C., *Bryant, NJ., *Girotti, M., *Rea, S. & James, DE. 'Tomosyn interacts with the t-SNAREs Syntaxin4 and SNAP23 and Plays a role in Insulin-Stimulated GLUT4 translocation'. J Biol Chem 2003; 278(37): pp. 35093 - 35101.

Williams, TJ., Schneider, RP. & Willcox, MD. 'The effect of protein-coated contact lenses on the adhesion and viability of gram negative bacteria'. Current Eye Research 2003; 27(4): pp. 227 - 235.

*Xia, HH., *Talley, NJ., *Blum, AL., *O'Morain, C., *Stoltes, M., *Bolling-Sternevald, E. & Mitchell, HM. 'Clinical and pathological implications of IgG antibody responses to Helicobacter pylori and its virulence factors in non-ulcer dyspepsia'. Alimentary Pharmacology and Therapeutics 2003; 17: pp. 935 - 943.

Journal Article - Other Refereed

*Doisneau-Sixou, SF., Sergio, CM., Carroll, JS., Hui, R., Musgrove, EA. & Sutherland, RL. 'Estrogen and antiestrogen regulation of cell cycle progresion in breast cancer cells'. Endocr Relat Cancer 2003; 10: pp. 179 - 186.

*Raetzman, LT., *Ross, SA., *Cook, S., Dunwoodie, SL., *Camper, SA. & Thomas, PS. 'Developmental regulation of Noteh signaling genes in the embryonic pituitary: Notch 2 is a target of Propl.'. Mechanisms of Development 2003; 2(265): pp. 329 - 340.

*Rodriguez, TA., *Sparrow, DB., *Scott, AN., *Withington, SL., *Lynch, DK., *Beddington, RS. & Dunwoodie, SL. 'Cited1 is required for embryonic survival and normal placental development.'. Mol Cell Biol 2003; 24(1): pp. 228 - 244.

*Schlaepfer, IR., *Pulawa, LK., *Ferreira, LD., *Capell, WH., *Eckel, RH. & James, DE. 'Increased epxression of the SNARE accessory protein Munc18c in lipid-mediated insulin resistance'. J Lipid Res 2003; 44: pp. 1174 - 1181.

*Sousa-Nunes, R., *Rana, A., *Kettleborough, R., *Brickman, JM., *Clements, M., *Forrest, A., *Grimmond, S., *Avner, P., *Smith, JC., Dunwoodie, SL. & *Beddington, RS. 'Characterising Embryonic Gene Expression Patterns in the Mouse Using Non-Redundant Sequence-Based Selection.'. Genome Res 2003; (13): pp. 2609 - 2620.

*Sutter, N., *Fiering, S., *Groudine, M. & Martin, DI. 'Chromatin insulation by a transcriptional activator'. Proc Natl Acad Sci USA 2003; 100: pp. 1105 - 1110.

*Turnpennt, PD., *Whittock, N., *Duncan, J., Dunwoodie, SL., *Kusumi, K. & *Ellard, S. 'Novel mutations in DLL3, a somitogenesis gene encoding a ligand for the Notch signalling pathway, cause a consistent pattern of abnormal vertebral segmentation in spondylocostal dysostosis.'. J. Med. Genet 2003; (40): pp. 333 - 339.

*Xin, MY., Webb, JS., Holmstrom, CG. & Kjelleberg, S. 'Application of denaturing gradient get electrophoresis (DGGE) in microbial ecology'. ACTA Ecologica Sinica 2003; 23: pp. 1561 - 1569.

Journal Article - Non Refereed

Day, AS., Van Zanten, S., *Otley, AR., *Best, L., *Griffiths, A. & *Sherman, PM. 'Use of LARA-urea breath test in the diagnosis of Helicobacter pylori infection in children and adolescents: A preliminary study'. Can J Gastroenterol 2003; 17(12): pp. 701 - 706.

Richardson, D., Sekyere, EO. & Dunn, LL. 'The double-edged nature of using genetic databases: Melanotransferrin genesis and transcripts'. FEBS Lett 2003; 574((1-3)): p. 233.

Takayama, KM. 'Visualising the Science of Genomics - an international online research project'. Microbiology Australia 2003; 24: pp. 32 - 33.

Conference Pub - Full Paper Refereed

Bain, ME. & Gaeta, BA. 'Learning Quantitative Gene Interactions from Microarray Data'. In: Proceedings of 2nd Australasian Data Mining Workshop. Sydney, UJniversity Technology Sydney, pp. 35 - 49 2003.

Tyrelle, GD. & King, GC. 'A platform for the description, distribution and analysis of genetic polymorphism data'. In: Bioinformactics Conference in Research and Practice in Information Technology (CRPIT) series. Australia, Australian Computer Society, pp. 173 - 180 2003.

Conference - Full paper, non referee

Boecking, T., Chilcott, TC., Coster, HG., Barrow, KD. & *James, M. 'Organic monolayers on silicon: electrical impedance spectroscopy methodology towards studying bilayers on silicon'. In: IMSTEC '03. Australia, UNESCO Centre for Membrane Science & Technology, pp. 1 - 6 2003.

Conference Pub - Extract

Labbate, M., Zhu, H., Queck, SY., Rice, SA., *Givskov, M. & Willcox, MD. 'N-acyl homoserine lactone regulation of adhesion in Serratia marcescens MG1'. In: Biofilms 2003 Program and Abstracts Book. USA, American Society for Microbiology, p. 305 2003.

Papas, EB., Chan, EK., *Sarian, L. & Tan, JY. 'Does the quality of vision affect the perception of ocular discomfort?'. In: Investigative Ophthalmology and Visual Science. USA, Association for Research in Vision and Ophthalmology, p. 3694 2003.

Computer Software

Takayama, KM. 2003, Visualising the Science of Genomics, University of New South Wales, Sydney, Australia.

Takayama, KM., *Bennett, R. & *Broadfoot, O. 2003, Visualising the Science of Genomics, CDFA, Sydney.

Thesis

Boonmee, M. 2003, 'Strategies for lactate removel for the improved production of the dairy starter culture Lactococcus lactis NA133', PhD, .

Cameron, DM. 2003, 'Interactions of translation factors with bacterial ribisome: A genetic and biochemical study of the ribosomal factor-binding region', PhD, .

Moffitt, MC. 2003, 'Non-ribosomal biosynthesis of the cyanobacterial toxin nodularin', PhD, .

Thompson, LJ. 2003, 'Use of Microarray technology to study the physiology and pathogenesis of mouse colonizing strain of Helicobacter pylori', PhD, .