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BINF1001 Course Coordinator Research Description:Bioinformatics Computational immunogenetics. Bioinformatics of gene regulation Other Professional Activities:Board of directors, International Society for Computational Biology. Management committee, Bioinformatics Australia. Chair, Bioinformatics Australia 2006 conference. Co-chair, education working group, Asia-Pacific bioinformatics network Member, advisory board, Thailand National Bioinformatics Helpdesk, BABS Computing Committee Chair Selected Recent Publications:Gaeta, B.A, Malming. H.R, Jackson, K.J.L., Bain, M.E, Wilson, P and Collins, A.M. (2007) iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences. Bioinformatics. 23:1580-7. Jackson K.J.L, Gaeta, B.A and Collins, A.M. Identifying highly mutated IGHD genes in the junctions of rearranged human immunoglobulin heavy chain genes (2007) J Immunol Methods. 324:26-37 Ahsan, N, Bain, M., Potter, J, Gaeta, B and Temple, M. (2006) Learning causal networks from microarray data Proceedings of the Workshop on Intelligent Systems for Bioinformatics 2006 Lee, C.E.H., Dahlke, I., Gaeta, B, Malming, H.R., Bain, M.E., Sewell W. and Collins, A.M. (2006) Reconsidering the human immunoglobulin heavy chain locus. 1. An evaluation of the functional human IGHD gene repertoire. Immunogenetics 57 917 Jackson, K.J.L, Gaeta, B.A, Sewell, W. Collins, A.M. (2004) Exonuclease activity and P nucleotide addition in the generation of the expressed immunoglobulin repertoire BMC Immunology 5 19 Collins, A. M. Ikutani, M. Puiu, D. Buck, G. A. Nadkarni, A. Gaeta, B. (2004) Partitioning of rearranged Ig genes by mutation analysis demonstrates D-D fusion and V gene replacement in the expressed human repertoire J Immunol 172 340-348 Bain, M., Gaeta, B, Learning Quantitative Gene Interactions from Microarray Data, in ADM 2003: Proc. of the 2nd Australian Workshop on Data Mining, S. Simoff, Williams, G, Hegland, M, Editor. 2003, University of Technology, Sydney. 35-49 |
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